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Journal of Dental Research
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CRITICAL REVIEWS IN ORAL BIOLOGY & MEDICINE

siRNA, miRNA, and shRNA: in vivo Applications

P.N. Pushparaj1,*,3, J.J. Aarthi1, J. Manikandan1 and S.D. Kumar2,*

1 Department of Physiology, National University of Singapore, Singapore; and
2 Department of Anatomy, National University of Singapore, 2 Medical Drive, MD9 #01-05, Singapore 117597

Correspondence: * corresponding authors, p.pushparaj{at}clinmed.gla.ac.uk; antsdk{at}nus.edu.sg

RNA interference (RNAi), an accurate and potent gene-silencing method, was first experimentally documented in 1998 in Caenorhabditis elegans by Fire et al., who subsequently were awarded the 2006 Nobel Prize in Physiology/Medicine. Subsequent RNAi studies have demonstrated the clinical potential of synthetic small interfering RNAs (siRNAs) or short hairpin RNAs (shRNAs) in dental diseases, eye diseases, cancer, metabolic diseases, neurodegenerative disorders, and other illnesses. siRNAs are generally from 21 to 25 base-pairs (bp) in length and have sequence-homology-driven gene-knockdown capability. RNAi offers researchers an effortless tool for investigating biological systems by selectively silencing genes. Key technical aspects—such as optimization of selectivity, stability, in vivo delivery, efficacy, and safety—need to be investigated before RNAi can become a successful therapeutic strategy. Nevertheless, this area shows a huge potential for the pharmaceutical industry around the globe. Interestingly, recent studies have shown that the small RNA molecules, either indigenously produced as microRNAs (miRNAs) or exogenously administered synthetic dsRNAs, could effectively activate a particular gene in a sequence-specific manner instead of silencing it. This novel, but still uncharacterized, phenomenon has been termed ‘RNA activation’ (RNAa). In this review, we analyze these research findings and discussed the in vivo applications of siRNAs, miRNAs, and shRNAs.

Key Words: Caenorhabditis elegans • RNA interference • small-interfering RNAs • microRNAs • short hairpin RNAs • gene silencing • RNA activation • in vivo

Journal of Dental Research, Vol. 87, No. 11, 992-1003 (2008)
DOI: 10.1177/154405910808701109
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